ccfa

A gluten free diet and IBD

The University of North Carolina recently published the results of a study based on a longitudinal internet survey conducted by the Crohn's and Colitis Foundation of America (CCFA).  Almost 1700 people with inflammatory bowel disease (IBD) participated in the study including many people with Celiac disease, others who were gluten-sensitive, and even more who had tried a gluten free diet.  In the study, 66% of participants who were on a gluten free diet had improved gastro-intestinal symptoms, and 38% reported improvement of IBD flares. This study shows that potential role that diet, especially a gluten free diet, may have in IBD management.

However this study was only based on a longitudinal internet survey, and not as rigorous as clinical trials.  We must also keep this in mind in light of a recent study that suggested a gluten free diet placebo effect, though these studies were hardly robust and had their problems as well. 

While this post is not necessarily focused on the microbiome, there have been clear associations between Celiacs, IBD, nutrition, and the microbiome.

Please email blog@MicrobiomeInstitute.org for any comments, news, or ideas for new blog posts.

The views expressed in the blog are solely those of the author of the blog and not necessarily the American Microbiome Institute or any of our scientists, sponsors, donors, or affiliates.

Treating C. difficile without antibiotics

Scanning electron micgrograph of individual C. difficile bacilli cultured from a stool sample of an infected individual.

Scanning electron micgrograph of individual C. difficile bacilli cultured from a stool sample of an infected individual.

I recently had the pleasure of hearing a talk by Professor Xinhua Chen from the Beth Israel Deaconess Medical Center about various ways to treat C. difficile infections without antibiotics.  As we know, antibiotics are often successful in treating C. diff infections. However, 30% of all treated infections result in a relapse, likely due to the fact that these antibiotics kill commensal  bacteria which are needed to keep C. diff populations low.  In addition, Dr. Chen discussed how other bacteria can act as a 'sink' for the C. diff. toxins, which, when they bind to other bacteria, do not harm humans.  Therefore Dr. Chen is investigating methods that can prevent acute infection to buy time for commensal bacteria to reestablish themselves in the host.

Host inflammatory response is often the danger in C. Diff infections, and his lab has shown two drugs that help mitigate this response.  The first is a molecule called vascular endothelial growth factor (VEGF) that prevents the toxins from entering the vasculature, which is a cause of inflammation.  The second is by increasing the amount of lipotechoic acid (LTA) in the gut.  LTA is a major component of gram-positive bacteria that can bind to the toxins, much like commensal bacteria can, to prevent infection.  

In addition, Dr. Chen discussed an experiment based on fecal microbiota transfers (FMT).  His group bought two groups of mice, one which had high gut microbiome diversity and one with low gut microbiome diversity.  The mice with high microbiome diversity survived C. Diff infections while those with low microbiome diversity were killed by C. Diff.  When these mice were co-housed their microbiome diversity converged to a diversity that was somewhere between the two.  These mice all died with C. Diff. infection.  Dr. Chen though, was able to isolate one bacteria from the mice with high microbiome diversity, that when given to the mice with low microbiome diversity prevented C. Diff. infection.  His studies are still underway.

On a final note, Dr. Chen was against FMTs.  He thought there was too much 'hype' surrounding them, and that clinicians 'need to be cautious'.  He also discussed the work of Seres Health that has made an oral microbiome drug for C. Diff that includes only spore forming bacteria.   Some of the work came from a PLoS ONE article authored by Chen, but most of what he discussed has yet to be published.

 

Please email blog@MicrobiomeInstitute.org for any comments, news, or ideas for new blog posts.

The views expressed in the blog are solely those of the author of the blog and not necessarily the American Microbiome Institute or any of our scientists, sponsors, donors, or affiliates.

Inflammatory bowel disease (IBD) and the microbiome. iHMP blog #3

Micrograph of inflammation of the large intestine with IBD

Micrograph of inflammation of the large intestine with IBD

Inflammatory bowel disease (IBD) encompasses a group of diseases that include Crohn's disease and ulcerative colitis, among others.  Thus far, IBD has proven to be a very complex disease, with no straight-forward microbial causes.  Instead, it has been linked to the overall health of the microbiome, which includes disproportionate populations of healthy and unhealthy associated bacteria and their metabolites.

The iHMP is tackling the connection between IBD and the microbiome through a longitudinal IBD study.  The study will recruit 90 patients who are: adults recently diagnosed with IBD, children recently diagnosed with IBD, people with established cases of IBD, and people with no IBD who will serve as controls.  Each person in the study will sample his/her own stool once every 2 weeks for 1 year. The stool will be sampled for its entire microbial community, including bacteria and viruses, as well as proteins, and metabolites.  In addition, biopsies will be performed on the patients' guts periodically over the year.  Finally, blood samples will also be taken.

The overall goal of the study is threefold:
1) "identifying the molecular mechanisms by which the intestinal microbiome may trigger...IBD"
2) "determining if microbial composition predicts subsequent risk of flareups in [IBD]"
3) "testing whether successful response to therapy can be predicted from the stool microbiota"
(source)

This study will be completed within the year and all the data will be made available at ibdmdb.org.  Check back with this blog throughout the year for updates.

I also want to draw attention to the great work being supported by the Crohn's and Colitis Foundation of America's (CCFA) microbiome initiative.  The CCFA is entering the later stages of their own research projects and I encourage any interested people to check out the CCFA website.

Please email blog@MicrobiomeInstitute.org for any comments, news, or ideas for new blog posts.

The views expressed in the blog are solely those of the author of the blog and not necessarily the American Microbiome Institute or any of our scientists, sponsors, donors, or affiliates.